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Table 1 60 coral skeletal proteins detected by LC–MS/MS across all treatments and solubility fractions

From: Optimization of skeletal protein preparation for LC–MS/MS sequencing yields additional coral skeletal proteins in Stylophora pistillata

Stylophora pistillata genome hit      Solubility Fraction  
gi Number Accession Number Annotation Best score Go Categorization ASM AIM
1263115389 PFX12726.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Stylophora pistillata] 340.80   x
1263115517 PFX12813.1 Hypothetical protein AWC38_SpisGene23165 [Stylophora pistillata] 337.40   x
1263116757 PFX13778.1 Sacsin [Stylophora pistillata] 267.80   x
1263117261 PFX14205.1 Proto-oncogene tyrosine-protein kinase receptor Ret, partial [Stylophora pistillata] 336.70 a,c   x
1263119001 PFX15740.1 Protein FAM208A [Stylophora pistillata] 373.20 x x
1263119725 PFX16398.1 Hypothetical protein AWC38_SpisGene19330 [Stylophora pistillata] 273.10   x
1263122270 PFX18785.1 Mucin-4 [Stylophora pistillata] 449.50 a,c   x
1263130352 PFX26597.1 Complement C3 [Stylophora pistillata] 283.10 a,b,c   x
1263130510 PFX26751.1 Transmembrane protease serine 9 [Stylophora pistillata] 244.20 a   x
1263131615 PFX27832.1 Poly [ADP-ribose] polymerase 11 [Stylophora pistillata] 320.10 c   x
1263134664 PFX30831.1 Hypothetical protein AWC38_SpisGene4366 [Stylophora pistillata] 322.20   x
1263134737 PFX30903.1 Hypothetical protein AWC38_SpisGene4292 [Stylophora pistillata] 548.90   x
1263135656 PFX31810.1 Nidogen-2 [Stylophora pistillata] 286.20 a,c   x
1270028962 XP_022783323.1 Phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Stylophora pistillata] 406.60 c   x
1270029544 XP_022786582.1 Synapsin-2-like isoform X2 [Stylophora pistillata] 320.50 c x x
1270031975 XP_022799089.1 CUB domain-containing protein-like isoform X2 [Stylophora pistillata] 699.70   x
1270032917 XP_022804012.1 EGF and laminin G domain-containing protein-like [Stylophora pistillata] 384.10 a   x
1270036141 XP_022779720.1 Vitellogenin-like [Stylophora pistillata] 416.00 b,c   x
1270037242 XP_022780303.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111321626 [Stylophora pistillata] 353.60 a,b,c x  
1270037961 XP_022780690.1 Skeletal aspartic acid-rich protein 2-like [Stylophora pistillata] 723.60 a   x
1270037969 XP_022780694.1 CUB and peptidase domain-containing protein 2-like [Stylophora pistillata] 285.80 a x x
1270041141 XP_022782398.1 Skeletal aspartic acid-rich protein 1-like [Stylophora pistillata] 709.80 x x
1270042352 XP_022783044.1 Uncharacterized protein LOC111323869 [Stylophora pistillata] 283.60   x
1270043038 XP_022783415.1 Coadhesin-like isoform X3 [Stylophora pistillata] 411.20 a   x
1270044042 XP_022783952.1 Collagenase 3-like [Stylophora pistillata] 262.90 a,c   x
1270045301 XP_022784623.1 Cation channel sperm-associated protein subunit beta-like [Stylophora pistillata] 328.40 a,c   x
1270049598 XP_022786918.1 Major yolk protein-like isoform X2 [Stylophora pistillata] 476.50 a,c   x
1270052030 XP_022788227.1 Hephaestin-like protein [Stylophora pistillata] 539.80 a,c   x
1270052971 XP_022788730.1 Chymotrypsin-like elastase family member 1 [Stylophora pistillata] 264.80 a,c   x
1270054595 XP_022789591.1 Endothelin-converting enzyme 1-like isoform X2 [Stylophora pistillata] 94.10 a,b,c   x
1270055217 XP_022789932.1 MAGUK p55 subfamily member 7-like [Stylophora pistillata] 313.70 a   x
1270056169 XP_022790441.1 PHD finger protein 21A-like [Stylophora pistillata] 277.90 c   x
1270059479 XP_022792212.1 Ras-like protein 3 [Stylophora pistillata] 289.90 a,c   x
1270063049 XP_022794122.1 Galaxin-like isoform X2 [Stylophora pistillata] 309.40   x
1270063475 XP_022794351.1 Mammalian ependymin-related protein 1-like [Stylophora pistillata] 324.80 a,c   x
1270064196 XP_022794736.1 MAM and LDL-receptor class A domain-containing protein 2-like [Stylophora pistillata] 472.20   x
1270068394 XP_022796981.1 Uncharacterized skeletal organic matrix protein 8-like [Stylophora pistillata] 664.40   x
1270068396 XP_022796982.1 Uncharacterized protein LOC111335364 [Stylophora pistillata] 609.30   x
1270071953 XP_022798902.1 Low-density lipoprotein receptor-related protein 8-like [Stylophora pistillata] 257.10 c   x
1270073139 XP_022799541.1 Uncharacterized protein LOC111337489 [Stylophora pistillata] 461.10 b   x
1270080553 XP_022803524.1 Digestive cysteine proteinase 1-like [Stylophora pistillata] 262.20 a,c   x
1270081088 XP_022803808.1 Deleted in malignant brain tumors 1 protein-like [Stylophora pistillata] 344.70 c   x
1270081207 XP_022803872.1 Spore wall protein 2-like isoform X3 [Stylophora pistillata] 338.60   x
1270081241 XP_022803894.1 Uncharacterized protein LOC111341206 [Stylophora pistillata] 390.70 b   x
1270082891 XP_022804785.1 Thioredoxin reductase 1, cytoplasmic-like [Stylophora pistillata] 337.00 c   x
1270084203 XP_022805470.1 Uncharacterized protein LOC111342641 [Stylophora pistillata] 256.10   x
1270085816 XP_022806326.1 ZP domain-containing protein-like [Stylophora pistillata] 393.90 a   x
1270086467 XP_022806664.1 Protein lingerer-like [Stylophora pistillata] 250.10 b,c   x
1270086954 XP_022806928.1 SLIT-ROBO Rho GTPase-activating protein 1-like [Stylophora pistillata] 309.10   x
1270087345 XP_022807143.1 Condensin-2 complex subunit D3-like [Stylophora pistillata] 278.10 c   x
1270087556 XP_022807256.1 Uncharacterized protein LOC111344300 [Stylophora pistillata] 280.40 a,c   x
1270088573 XP_022807807.1 Uncharacterized protein LOC111344812 [Stylophora pistillata] 365.30 a,b,c   x
1270089244 XP_022808163.1 Uncharacterized protein LOC111345150 [Stylophora pistillata] 310.20   x
1270090022 XP_022808576.1 Uncharacterized protein LOC111345553 isoform X2 [Stylophora pistillata] 320.10 a,c   x
1270091315 XP_022809269.1 Microtubule-associated tumor suppressor 1 homolog isoform X1 [Stylophora pistillata] 259.20 a,c   x
1270091317 XP_022809270.1 Microtubule-associated tumor suppressor 1 homolog isoform X2 [Stylophora pistillata] 256.40   x
1270093788 XP_022810585.1 Von Willebrand factor D and EGF domain-containing protein-like, partial [Stylophora pistillata] 298.80   x
1270095516 XP_022778254.1 Uncharacterized protein LOC111319781 [Stylophora pistillata] 250.70 c   x
1270095572 XP_022778283.1 Uncharacterized protein LOC111319816, partial [Stylophora pistillata] 508.10 x x
190710633 ACE95141.1 Carbonic anhydrase [Stylophora pistillata] 495.20 a,c x x
  1. Proteins are listed in order of accession number. Geno ontology categorization is represented as aECM/transmembrane and protein modification, bmembrane processing, and cvesicle/secretion and metal binding