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Table 1 60 coral skeletal proteins detected by LC–MS/MS across all treatments and solubility fractions

From: Optimization of skeletal protein preparation for LC–MS/MS sequencing yields additional coral skeletal proteins in Stylophora pistillata

Stylophora pistillata genome hit

    

Solubility Fraction

 

gi Number

Accession Number

Annotation

Best score

Go Categorization

ASM

AIM

1263115389

PFX12726.1

Retrovirus-related Pol polyprotein from transposon 17.6 [Stylophora pistillata]

340.80

 

x

1263115517

PFX12813.1

Hypothetical protein AWC38_SpisGene23165 [Stylophora pistillata]

337.40

 

x

1263116757

PFX13778.1

Sacsin [Stylophora pistillata]

267.80

 

x

1263117261

PFX14205.1

Proto-oncogene tyrosine-protein kinase receptor Ret, partial [Stylophora pistillata]

336.70

a,c

 

x

1263119001

PFX15740.1

Protein FAM208A [Stylophora pistillata]

373.20

x

x

1263119725

PFX16398.1

Hypothetical protein AWC38_SpisGene19330 [Stylophora pistillata]

273.10

 

x

1263122270

PFX18785.1

Mucin-4 [Stylophora pistillata]

449.50

a,c

 

x

1263130352

PFX26597.1

Complement C3 [Stylophora pistillata]

283.10

a,b,c

 

x

1263130510

PFX26751.1

Transmembrane protease serine 9 [Stylophora pistillata]

244.20

a

 

x

1263131615

PFX27832.1

Poly [ADP-ribose] polymerase 11 [Stylophora pistillata]

320.10

c

 

x

1263134664

PFX30831.1

Hypothetical protein AWC38_SpisGene4366 [Stylophora pistillata]

322.20

 

x

1263134737

PFX30903.1

Hypothetical protein AWC38_SpisGene4292 [Stylophora pistillata]

548.90

 

x

1263135656

PFX31810.1

Nidogen-2 [Stylophora pistillata]

286.20

a,c

 

x

1270028962

XP_022783323.1

Phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Stylophora pistillata]

406.60

c

 

x

1270029544

XP_022786582.1

Synapsin-2-like isoform X2 [Stylophora pistillata]

320.50

c

x

x

1270031975

XP_022799089.1

CUB domain-containing protein-like isoform X2 [Stylophora pistillata]

699.70

 

x

1270032917

XP_022804012.1

EGF and laminin G domain-containing protein-like [Stylophora pistillata]

384.10

a

 

x

1270036141

XP_022779720.1

Vitellogenin-like [Stylophora pistillata]

416.00

b,c

 

x

1270037242

XP_022780303.1

LOW QUALITY PROTEIN: uncharacterized protein LOC111321626 [Stylophora pistillata]

353.60

a,b,c

x

 

1270037961

XP_022780690.1

Skeletal aspartic acid-rich protein 2-like [Stylophora pistillata]

723.60

a

 

x

1270037969

XP_022780694.1

CUB and peptidase domain-containing protein 2-like [Stylophora pistillata]

285.80

a

x

x

1270041141

XP_022782398.1

Skeletal aspartic acid-rich protein 1-like [Stylophora pistillata]

709.80

x

x

1270042352

XP_022783044.1

Uncharacterized protein LOC111323869 [Stylophora pistillata]

283.60

 

x

1270043038

XP_022783415.1

Coadhesin-like isoform X3 [Stylophora pistillata]

411.20

a

 

x

1270044042

XP_022783952.1

Collagenase 3-like [Stylophora pistillata]

262.90

a,c

 

x

1270045301

XP_022784623.1

Cation channel sperm-associated protein subunit beta-like [Stylophora pistillata]

328.40

a,c

 

x

1270049598

XP_022786918.1

Major yolk protein-like isoform X2 [Stylophora pistillata]

476.50

a,c

 

x

1270052030

XP_022788227.1

Hephaestin-like protein [Stylophora pistillata]

539.80

a,c

 

x

1270052971

XP_022788730.1

Chymotrypsin-like elastase family member 1 [Stylophora pistillata]

264.80

a,c

 

x

1270054595

XP_022789591.1

Endothelin-converting enzyme 1-like isoform X2 [Stylophora pistillata]

94.10

a,b,c

 

x

1270055217

XP_022789932.1

MAGUK p55 subfamily member 7-like [Stylophora pistillata]

313.70

a

 

x

1270056169

XP_022790441.1

PHD finger protein 21A-like [Stylophora pistillata]

277.90

c

 

x

1270059479

XP_022792212.1

Ras-like protein 3 [Stylophora pistillata]

289.90

a,c

 

x

1270063049

XP_022794122.1

Galaxin-like isoform X2 [Stylophora pistillata]

309.40

 

x

1270063475

XP_022794351.1

Mammalian ependymin-related protein 1-like [Stylophora pistillata]

324.80

a,c

 

x

1270064196

XP_022794736.1

MAM and LDL-receptor class A domain-containing protein 2-like [Stylophora pistillata]

472.20

 

x

1270068394

XP_022796981.1

Uncharacterized skeletal organic matrix protein 8-like [Stylophora pistillata]

664.40

 

x

1270068396

XP_022796982.1

Uncharacterized protein LOC111335364 [Stylophora pistillata]

609.30

 

x

1270071953

XP_022798902.1

Low-density lipoprotein receptor-related protein 8-like [Stylophora pistillata]

257.10

c

 

x

1270073139

XP_022799541.1

Uncharacterized protein LOC111337489 [Stylophora pistillata]

461.10

b

 

x

1270080553

XP_022803524.1

Digestive cysteine proteinase 1-like [Stylophora pistillata]

262.20

a,c

 

x

1270081088

XP_022803808.1

Deleted in malignant brain tumors 1 protein-like [Stylophora pistillata]

344.70

c

 

x

1270081207

XP_022803872.1

Spore wall protein 2-like isoform X3 [Stylophora pistillata]

338.60

 

x

1270081241

XP_022803894.1

Uncharacterized protein LOC111341206 [Stylophora pistillata]

390.70

b

 

x

1270082891

XP_022804785.1

Thioredoxin reductase 1, cytoplasmic-like [Stylophora pistillata]

337.00

c

 

x

1270084203

XP_022805470.1

Uncharacterized protein LOC111342641 [Stylophora pistillata]

256.10

 

x

1270085816

XP_022806326.1

ZP domain-containing protein-like [Stylophora pistillata]

393.90

a

 

x

1270086467

XP_022806664.1

Protein lingerer-like [Stylophora pistillata]

250.10

b,c

 

x

1270086954

XP_022806928.1

SLIT-ROBO Rho GTPase-activating protein 1-like [Stylophora pistillata]

309.10

 

x

1270087345

XP_022807143.1

Condensin-2 complex subunit D3-like [Stylophora pistillata]

278.10

c

 

x

1270087556

XP_022807256.1

Uncharacterized protein LOC111344300 [Stylophora pistillata]

280.40

a,c

 

x

1270088573

XP_022807807.1

Uncharacterized protein LOC111344812 [Stylophora pistillata]

365.30

a,b,c

 

x

1270089244

XP_022808163.1

Uncharacterized protein LOC111345150 [Stylophora pistillata]

310.20

 

x

1270090022

XP_022808576.1

Uncharacterized protein LOC111345553 isoform X2 [Stylophora pistillata]

320.10

a,c

 

x

1270091315

XP_022809269.1

Microtubule-associated tumor suppressor 1 homolog isoform X1 [Stylophora pistillata]

259.20

a,c

 

x

1270091317

XP_022809270.1

Microtubule-associated tumor suppressor 1 homolog isoform X2 [Stylophora pistillata]

256.40

 

x

1270093788

XP_022810585.1

Von Willebrand factor D and EGF domain-containing protein-like, partial [Stylophora pistillata]

298.80

 

x

1270095516

XP_022778254.1

Uncharacterized protein LOC111319781 [Stylophora pistillata]

250.70

c

 

x

1270095572

XP_022778283.1

Uncharacterized protein LOC111319816, partial [Stylophora pistillata]

508.10

x

x

190710633

ACE95141.1

Carbonic anhydrase [Stylophora pistillata]

495.20

a,c

x

x

  1. Proteins are listed in order of accession number. Geno ontology categorization is represented as aECM/transmembrane and protein modification, bmembrane processing, and cvesicle/secretion and metal binding